Other Packages and Libraries

Packages

Other packages available on the cluster.

• IDL
• GDL
• MATLAB
• Octave
• Mathematica
• COMSOL Multiphysics
• Blender
• R
• SAS

Domain specific (e.g. computational chemistry and biology)

• GROMACS
• DOCK
• GAMESS
• CHARMM
• Gaussian
• NAMD
• VMD
• Surflex
• Autodock4
• Maestro
• MrBayes
• Meep

Libraries

Libraries available on the cluster, which can be used in your code.

Parallel programming (besides MPI)

• OpenMP
• MapReduce-MPI

Scientific

• netCDF
• HDF4
• HDF5
• szip

Math

• MKL
• OpenBLAS
• ATLAS
• ACML: BLAS
• LAPACK
• SCALAPACK
• BLACS
• GotoBLAS
• FFTW